SPICE
Parameter
Query sequences
Link to Tool and Datebases
Sequence Pattern
5'
3'
target RNA :
RefSeq human RNA release 80 (Jan, 2017)
RefSeq human RNA release 70 (May, 2015)
reverse complement:
Miss_match :
0~3
0
1
2
3
>Fasta format CGGATCCCCGGGGAAGNNTTANNANTCCTCCNNANNNNGAAGNNCCGNTTTNCCTTTCCCCGAAGAGAGCGTCGACGATGTGGTGTAAAAAAAAAACCATTCCAAAAAATCTAGAAAAAACTCATGTAATGGTCAGCAGCTGGTAATATTGCTGCTGACCATTACATGAGCGGGATCCCGCGTCCTTTCCACAAGATATATAAACCCAAGAAATCGAAATACTTTCAAGTTACGGTAAGCATATGATAGTCCATTTTAAAACATAATTTTAAAACTGCAAACTACCCAANAAATTATTACTTTCTACGTCACGTATTTTGTACTAATATCTTTGTGTTTACAGTCAAATTAATTCTAATTATCTCTCTAACAGCCTTGTATCGTATATGCAAATATGAAGGAATCATGGGAAATAGGCCCTCTTCCTGCCCGACCTTCTCGAGCGCAATTAATGTAAGTTAGCTCACTCATTCGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGACCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGNTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAAGTATCTCAGTTCGGNGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACGCTGNGCCTTATCNGGNACNTATCGTCTTGGGNCCNACCNGGTAAAACAGACTTATCGCCNTGGNAGCANCNCTGGTAANGGGATTGCNNAGGGNGGTT
Or file upload (multiple selection)
Developed in
the Sugiyama Laboratory
at
Tokyo Univ. Tech.
by Kenta Kamatsuka
1
, Masahiro Hattori
2
, Tomoyasu Sugiyama
1
1
Tokyo Univ.tech.
2
RNAi inc.
1:
EURASIP Journal on Bioinformatics and Systems Biology
2:PubMed:
26941783